Gene: CSS0025044
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0025044
- Transcript Identifier CSS0025044.1
- Gene Type Coding gene
- Location Chr4 : 164657262-164664662 : negative
Gene Family Information
- ID HOM05D000250
- #Genes/#Species 1697/100
- Phylogenetic origin
- ID ORTHO05D004181
- #Genes/#Species 188/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0025044.1
Descriptions
- Description PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Solanum lycopersicum]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G53110 |
GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc04g082790.4 |
GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT3G53110 |
GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G53110 |
GO:0016973 | ISO | PLAZA Integrative Orthology | poly(A)+ mRNA export from nucleus | AT3G53110 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc04g082790.4 |
GO:0008186 | ISO | PLAZA Integrative Orthology | ATPase, acting on RNA | AT3G53110 |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G53110 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT3G53110 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G53110 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G53110 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.10.3.1 | RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.ATP-dependent helicase (DBP5/LOS4) |