Gene: COL.COLO4_37720

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_37720
  • Transcript Identifier COL.rna36399
  • Gene Type Coding gene
  • Location AWUE01024206.1 : 31832-38385 : positive

Gene Family Information

  • ID HOM05D002728
  • #Genes/#Species 253/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna36399
  • GenBank OMO51351.1
  • id gene37692
  • gene_name COLO4_37720
  • uniprot A0A1R3FZT6

Descriptions

  • Description Nucleic acid binding, tRNA/helicase-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Homology (enrichment)DNA repair HOM05D002728
GO:0006260
ISO
PLAZA Homology (enrichment)DNA replication HOM05D002728
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT3G02920
GO:0006310
ISO
PLAZA Homology (enrichment)DNA recombination HOM05D002728

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
GOA Databasehelicase activity
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D002728
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D002728
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G02920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G02920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014892 Replication protein A, C-terminal
IPR012340 Nucleic acid-binding, OB-fold
IPR040260 Replication factor A protein-like
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
13.2.3.5.2 Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA2
13.3.5.4.4.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.component RPA2