Gene: COL.COLO4_35694

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_35694
  • Transcript Identifier COL.rna34382
  • Gene Type Coding gene
  • Location AWUE01022777.1 : 13760-18671 : negative

Gene Family Information

  • ID HOM05D001605
  • #Genes/#Species 401/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna34382
  • GenBank OMO56305.1
  • id gene35666
  • gene_name COLO4_35694
  • uniprot A0A1R3GDZ0

Descriptions

  • Description putative transcription elongation factor protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0006412
IEA
GOA Databasetranslation
GO:0032784
IEA
GOA Databaseregulation of DNA-templated transcription, elongation
GO:0032784
IEA
InterProregulation of DNA-templated transcription, elongation
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D001605

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0003735
IEA
GOA Databasestructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039659 Transcription elongation factor SPT5
IPR014722 Ribosomal protein L2, domain 2
IPR008991 Translation protein SH3-like domain superfamily
IPR005824 KOW
IPR041973 Spt5, KOW domain repeat 1
IPR041976 Spt5, KOW domain repeat 3
IPR022581 Spt5 transcription elongation factor, N-terminal
Mapman id Description
15.3.5.3.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT5