Gene: COL.COLO4_34532

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_34532
  • Transcript Identifier COL.rna33223
  • Gene Type Coding gene
  • Location AWUE01022408.1 : 53477-56027 : positive

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna33223
  • GenBank OMO58556.1
  • id gene34504
  • gene_name COLO4_34532
  • uniprot A0A1R3GKF3

Descriptions

  • Description Glycoside hydrolase, family 28
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
IEA
GOA Databasemetabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0009831
ISO
PLAZA Integrative Orthologyplant-type cell wall modification involved in multidimensional cell growth AT1G48100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004650
IEA
GOA Databasepolygalacturonase activity
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
IPR000743 Glycoside hydrolase, family 28
IPR006626 Parallel beta-helix repeat
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase