Gene: COL.COLO4_31732

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31732
  • Transcript Identifier COL.rna30446
  • Gene Type Coding gene
  • Location AWUE01020869.1 : 120780-120998 : negative

Gene Family Information

  • ID HOM05D001159
  • #Genes/#Species 533/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30446
  • GenBank OMO64919.1
  • id gene31704
  • gene_name COLO4_31732
  • uniprot A0A1R3H3K1

Descriptions

  • Description protein transport protein SEC23-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0006888
ISO
PLAZA Homology (enrichment)endoplasmic reticulum to Golgi vesicle-mediated transport HOM05D001159
GO:0090114
ISO
PLAZA Homology (enrichment)COPII-coated vesicle budding HOM05D001159
GO:0006886
ISO
PLAZA Homology (enrichment)intracellular protein transport HOM05D001159

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D001159

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0012507
IEA
GOA DatabaseER to Golgi transport vesicle membrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0016020
IEA
GOA Databasemembrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005737
IEA
GOA Databasecytoplasm
GO:0030127
ISO
PLAZA Homology (enrichment)COPII vesicle coat HOM05D001159

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037364 Protein transport protein Sec23
Mapman id Description
35.1 not assigned.annotated