Gene: COL.COLO4_31221
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_31221
- Transcript Identifier COL.rna29936
- Gene Type Coding gene
- Location AWUE01020829.1 : 93471-98125 : negative
Gene Family Information
- ID HOM05D001195
- #Genes/#Species 523/97
- Phylogenetic origin
- ID ORTHO05D001138
- #Genes/#Species 477/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna29936
- GenBank OMO65469.1
- id gene31193
- gene_name COLO4_31221
- uniprot A0A1R3H570
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071897 | IEA | GOA Database | DNA biosynthetic process | |
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0006260 | IEA | InterPro | DNA replication |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003887 | IEA | GOA Database | DNA-directed DNA polymerase activity | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009360 | IEA | GOA Database | DNA polymerase III complex | |
| GO:0009360 | IEA | InterPro | DNA polymerase III complex | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G18820 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012763 | DNA polymerase III, subunit gamma/ tau, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR045085 | DNA polymerase III, subunit gamma/tau, helical lid domain |
| IPR022754 | DNA polymerase III, gamma subunit, domain III |
| IPR008921 | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |