Gene: COL.COLO4_31187

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31187
  • Transcript Identifier COL.rna29902
  • Gene Type Coding gene
  • Location AWUE01020828.1 : 148875-151912 : negative

Gene Family Information

  • ID HOM05D001232
  • #Genes/#Species 504/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29902
  • GenBank OMO65517.1
  • id gene31159
  • gene_name COLO4_31187
  • uniprot A0A1R3H5A5

Descriptions

  • Description Zinc finger, GATA-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G51600
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G51600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000679 Zinc finger, GATA-type
IPR013088 Zinc finger, NHR/GATA-type
IPR010399 Tify domain
IPR010402 CCT domain
Mapman id Description
15.5.1.3.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (C-GATA)