Gene: COL.COLO4_31004

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31004
  • Transcript Identifier COL.rna29719
  • Gene Type Coding gene
  • Location AWUE01020808.1 : 99385-103146 : negative

Gene Family Information

  • ID HOM05D000777
  • #Genes/#Species 759/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29719
  • GenBank OMO65814.1
  • id gene30976
  • gene_name COLO4_31004
  • uniprot A0A1R3H652

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006486
IEA
GOA Databaseprotein glycosylation
GO:0006486
IEA
InterProprotein glycosylation
GO:0018258
ISO
PLAZA Integrative Orthologyprotein O-linked glycosylation via hydroxyproline AT4G21060
GO:0080147
ISO
PLAZA Integrative Orthologyroot hair cell development AT4G21060
GO:0010405
ISO
PLAZA Integrative Orthologyarabinogalactan protein metabolic process AT4G21060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990714
ISO
PLAZA Integrative Orthologyhydroxyproline O-galactosyltransferase activity AT4G21060
GO:0035250
ISO
PLAZA Integrative OrthologyUDP-galactosyltransferase activity AT4G21060
GO:0016758
IEA
GOA Databasehexosyltransferase activity
GO:0016758
IEA
InterProhexosyltransferase activity
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016757
IEA
GOA Databaseglycosyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G21060
GO:0012505
ISO
PLAZA Integrative Orthologyendomembrane system AT4G21060
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0000139
IEA
GOA DatabaseGolgi membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001079 Galectin, carbohydrate recognition domain
IPR002659 Glycosyl transferase, family 31
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
18.1.2.1.5 Protein modification.glycosylation.O-linked glycosylation.hydroxyproline O-linked glycosylation.hydroxyproline-O-galactosyltransferase (GALT)
21.4.1.1.5.1 Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein activities.arabinogalactan protein glycosylation.hydroxyproline O-galactosyltransferase (GALT)