Gene: COL.COLO4_30370
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_30370
- Transcript Identifier COL.rna29086
- Gene Type Coding gene
- Location AWUE01020724.1 : 22939-33568 : negative
Gene Family Information
- ID HOM05D000062
- #Genes/#Species 4032/100
- Phylogenetic origin
- ID ORTHO05D001642
- #Genes/#Species 376/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna29086
- GenBank OMO66761.1
- id gene30342
- gene_name COLO4_30370
- uniprot A0A1R3H8V6
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G79930 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G79930 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G79920 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G79930 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G79920 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G79930 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002885 | Pentatricopeptide repeat |
| IPR043129 | ATPase, nucleotide binding domain |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR013126 | Heat shock protein 70 family |
| IPR029047 | Heat shock protein 70kD, peptide-binding domain superfamily |
| IPR029048 | Heat shock protein 70kD, C-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 16.11.4.2.1.11 | RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.splicing factor (MISF68) |
| 19.1.1.2.1.1 | Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.ERdj3B-BiP-SDF2 chaperone complex.chaperone component BiP |