Gene: COL.COLO4_29443
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_29443
- Transcript Identifier COL.rna28160
- Gene Type Coding gene
- Location AWUE01020356.1 : 5461-15304 : negative
Gene Family Information
- ID HOM05D000861
- #Genes/#Species 694/100
- Phylogenetic origin
- ID ORTHO05D007385
- #Genes/#Species 131/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna28160
- GenBank OMO68733.1
- id gene29415
- gene_name COLO4_29443
- uniprot A0A1R3HEK2
Descriptions
- Description UbiA prenyltransferase family
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010236 | ISO | PLAZA Integrative Orthology | plastoquinone biosynthetic process | AT3G11945 |
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D000861 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0004659 | IEA | GOA Database | prenyltransferase activity | |
| GO:0004659 | IEA | InterPro | prenyltransferase activity | |
| GO:0016765 | IEA | GOA Database | transferase activity, transferring alkyl or aryl (other than methyl) groups | |
| GO:0016765 | IEA | InterPro | transferase activity, transferring alkyl or aryl (other than methyl) groups | |
| GO:0010357 | ISO | PLAZA Integrative Orthology | homogentisate solanesyltransferase activity | AT3G11945 |
| GO:0010356 | ISO | PLAZA Integrative Orthology | homogentisate geranylgeranyltransferase activity | AT3G11945 |
| GO:0010355 | ISO | PLAZA Integrative Orthology | homogentisate farnesyltransferase activity | AT3G11945 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G11945 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 7.8.4.1 | Coenzyme metabolism.prenylquinone biosynthesis.plastoquinone biosynthesis.homogentisate solanesyltransferase (HST) |