Gene: COL.COLO4_28954
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_28954
- Transcript Identifier COL.rna27672
- Gene Type Coding gene
- Location AWUE01020167.1 : 147295-148758 : negative
Gene Family Information
- ID HOM05D000840
- #Genes/#Species 710/97
- Phylogenetic origin
- ID ORTHO05D000670
- #Genes/#Species 693/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna27672
- GenBank OMO69742.1
- id gene28926
- gene_name COLO4_28954
- uniprot A0A1R3HHE2
Descriptions
- Description putative transcription cofactor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | IEA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:0006355 | ISO | PLAZA Homology (enrichment) | regulation of transcription, DNA-templated | HOM05D000840 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003713 | IEA | GOA Database | transcription coactivator activity | |
| GO:0003713 | IEA | InterPro | transcription coactivator activity | |
| GO:0031490 | IEA | GOA Database | chromatin DNA binding | |
| GO:0031490 | IEA | InterPro | chromatin DNA binding | |
| GO:0003712 | ISO | PLAZA Homology (enrichment) | transcription coregulator activity | HOM05D000840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044661 | Mediator of RNA polymerase II transcription subunit 15a/b/c-like |
| Mapman id | Description |
|---|---|
| 15.3.4.4.3.5 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED15 |