Gene: COL.COLO4_27905
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_27905
- Transcript Identifier COL.rna26628
- Gene Type Coding gene
- Location AWUE01019713.1 : 46232-49014 : positive
Gene Family Information
- ID HOM05D000073
- #Genes/#Species 3933/98
- Phylogenetic origin
- ID ORTHO05D000033
- #Genes/#Species 3298/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna26628
- GenBank OMO71965.1
- id gene27877
- gene_name COLO4_27905
- uniprot A0A1R3HNM2
Descriptions
- Description Glycoside hydrolase, family 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT1G60090 |
| GO:0046283 | ISO | PLAZA Integrative Orthology | anthocyanin-containing compound metabolic process | AT4G27830 |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033907 | ISO | PLAZA Integrative Orthology | beta-D-fucosidase activity | Os03g0212800 |
| GO:0016798 | ISO | PLAZA Integrative Orthology | hydrolase activity, acting on glycosyl bonds | Os03g0212800 |
| GO:0004565 | ISO | PLAZA Integrative Orthology | beta-galactosidase activity | Os03g0212800 |
| GO:0042973 | ISO | PLAZA Integrative Orthology | glucan endo-1,3-beta-D-glucosidase activity | Os03g0212800 |
| GO:0008422 | ISO | PLAZA Integrative Orthology | beta-glucosidase activity | Os03g0212800 |
| GO:0080079 | ISO | PLAZA Integrative Orthology | cellobiose glucosidase activity | Os03g0212800 |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0080083 | ISO | PLAZA Integrative Orthology | beta-gentiobiose beta-glucosidase activity | Os03g0212800 |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G27830 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G26560 |
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT3G62750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |