Gene: COL.COLO4_27570
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_27570
- Transcript Identifier COL.rna26296
- Gene Type Coding gene
- Location AWUE01019632.1 : 41884-43314 : positive
Gene Family Information
- ID HOM05D000624
- #Genes/#Species 915/95
- Phylogenetic origin
- ID ORTHO05D000495
- #Genes/#Species 860/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna26296
- GenBank OMO72579.1
- id gene27542
- gene_name COLO4_27570
- uniprot A0A1R3HQA6
Descriptions
- Description GAGA binding-like protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0050793 | ISO | PLAZA Integrative Orthology | regulation of developmental process | AT1G14685 |
| GO:1901002 | ISO | PLAZA Integrative Orthology | positive regulation of response to salt stress | AT1G14685 |
| GO:0080157 | ISO | PLAZA Integrative Orthology | regulation of plant-type cell wall organization or biogenesis | AT1G14685 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT1G14685 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G14685 |
| GO:0000987 | ISO | PLAZA Integrative Orthology | cis-regulatory region sequence-specific DNA binding | AT1G14685 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT2G01930 |
| GO:1990837 | ISO | PLAZA Integrative Orthology | sequence-specific double-stranded DNA binding | AT1G14685 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR010409 | GAGA-binding transcriptional activator |
| Mapman id | Description |
|---|---|
| 15.5.32 | RNA biosynthesis.transcriptional regulation.transcription factor (BBR/BPC) |