Gene: COL.COLO4_26865

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_26865
  • Transcript Identifier COL.rna25592
  • Gene Type Coding gene
  • Location AWUE01019393.1 : 85911-93016 : positive

Gene Family Information

  • ID HOM05D002330
  • #Genes/#Species 291/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25592
  • GenBank OMO73792.1
  • id gene26837
  • gene_name COLO4_26865
  • uniprot A0A1R3HTZ6

Descriptions

  • Description Snf7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007034
IEA
GOA Databasevacuolar transport
GO:0007034
IEA
InterProvacuolar transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
IEA
GOA Databaseendosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005024 Snf7 family
IPR005735 Zinc finger, LSD1-type
Mapman id Description
22.4.1.3.3 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS2/CHMP2
27.2.1 Multi-process regulation.Programmed Cell Death (PCD) system.PCD regulatory protein (LSD/LOL)