Gene: COL.COLO4_26826

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_26826
  • Transcript Identifier COL.rna25553
  • Gene Type Coding gene
  • Location AWUE01019387.1 : 97293-106256 : negative

Gene Family Information

  • ID HOM05D000331
  • #Genes/#Species 1415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25553
  • GenBank OMO73869.1
  • id gene26798
  • gene_name COLO4_26826
  • uniprot A0A1R3HTZ3

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000114
ISO
PLAZA Integrative Orthologyregulation of establishment of cell polarity AT1G59610
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G59610
GO:0072583
ISO
PLAZA Integrative Orthologyclathrin-dependent endocytosis AT1G59610
GO:0006896
ISO
PLAZA Integrative OrthologyGolgi to vacuole transport AT1G10290
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT1G59610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030276
ISO
PLAZA Integrative Orthologyclathrin binding AT1G59610
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G59610
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G59610
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G10290
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G59610
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G10290
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G10290
GO:0009504
ISO
PLAZA Integrative Orthologycell plate AT1G59610
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G59610
GO:0045334
ISO
PLAZA Integrative Orthologyclathrin-coated endocytic vesicle AT1G59610
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G10290
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005856
IEA
GOA Databasecytoskeleton

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000375 Dynamin stalk domain
IPR001849 Pleckstrin homology domain
IPR045063 Dynamin, N-terminal
IPR011993 PH-like domain superfamily
IPR022812 Dynamin
IPR003130 Dynamin GTPase effector
IPR001401 Dynamin, GTPase domain
Mapman id Description
22.3.1.9.1 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.dynamin (DRP2)