Gene: COL.COLO4_23840

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_23840
  • Transcript Identifier COL.rna22580
  • Gene Type Coding gene
  • Location AWUE01018362.1 : 65188-65700 : positive

Gene Family Information

  • ID HOM05D000357
  • #Genes/#Species 1335/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna22580
  • GenBank OMO80963.1
  • id gene23812
  • gene_name COLO4_23840
  • uniprot A0A1R3IEF5

Descriptions

  • Description Zinc finger, AN1-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT4G22820
GO:0043161
ISO
PLAZA Integrative Orthologyproteasome-mediated ubiquitin-dependent protein catabolic process AT4G22820
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT4G22820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT4G22820
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G22820

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G12040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035896 AN1-like Zinc finger
IPR000058 Zinc finger, AN1-type
IPR002653 Zinc finger, A20-type
Mapman id Description
35.1 not assigned.annotated