Gene: COL.COLO4_23281

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_23281
  • Transcript Identifier COL.rna22022
  • Gene Type Coding gene
  • Location AWUE01018179.1 : 11464-11958 : positive

Gene Family Information

  • ID HOM05D001085
  • #Genes/#Species 565/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna22022
  • GenBank OMO82022.1
  • id gene23253
  • gene_name COLO4_23281
  • uniprot A0A1R3IHG3

Descriptions

  • Description Histone H1/H5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
GOA Databasenucleosome assembly
GO:0006334
IEA
InterPronucleosome assembly
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT2G18050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005694
IEA
GOA Databasechromosome
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR005818 Linker histone H1/H5, domain H15
IPR036390 Winged helix DNA-binding domain superfamily
IPR005819 Linker histone H1/H5
Mapman id Description
12.1.2.1 Chromatin organisation.chromatin structure.DNA bridging.linker histone (H1)