Gene: COL.COLO4_21215
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_21215
- Transcript Identifier COL.rna19971
- Gene Type Coding gene
- Location AWUE01017584.1 : 20270-20842 : negative
Gene Family Information
- ID HOM05D000204
- #Genes/#Species 1944/96
- Phylogenetic origin
- ID ORTHO05D000021
- #Genes/#Species 4050/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna19971
- GenBank OMO86368.1
- id gene21187
- gene_name COLO4_21215
- uniprot A0A1R3IUV6
Descriptions
- Description Auxin responsive SAUR protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | IEA | GOA Database | response to auxin | |
| GO:0009733 | IEA | InterPro | response to auxin | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | Solyc12g009280.3 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | Solyc12g009280.3 |
| GO:0009734 | ISO | PLAZA Integrative Orthology | auxin-activated signaling pathway | Solyc12g009280.3 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc12g009280.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005516 | ISO | PLAZA Integrative Orthology | calmodulin binding | AT3G43120 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT5G20810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003676 | Small auxin-up RNA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |