Gene: COL.COLO4_20456

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_20456
  • Transcript Identifier COL.rna19216
  • Gene Type Coding gene
  • Location AWUE01017167.1 : 45315-46718 : negative

Gene Family Information

  • ID HOM05D000534
  • #Genes/#Species 1021/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna19216
  • GenBank OMO88102.1
  • id gene20428
  • gene_name COLO4_20456
  • uniprot A0A1R3IZV0

Descriptions

  • Description Auxin efflux carrier
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0080162
IEA
GOA Databaseintracellular auxin transport
GO:0080162
IEA
InterProintracellular auxin transport
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0010252
ISO
PLAZA Integrative Orthologyauxin homeostasis AT1G71090
GO:0040009
ISO
PLAZA Integrative Orthologyregulation of growth rate AT1G71090
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G71090
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT1G71090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010329
ISO
PLAZA Integrative Orthologyauxin efflux transmembrane transporter activity AT1G71090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005789
ISO
PLAZA Integrative Orthologyendoplasmic reticulum membrane AT1G71090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036259 MFS transporter superfamily
IPR004776 Membrane transport protein
IPR039305 Protein PIN-LIKES 2/6
Mapman id Description
11.2.4.2 Phytohormone action.auxin.transport.auxin efflux transporter (PILS)
24.2.5.2.2 Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin transporter (PILS)