Gene: COL.COLO4_19643
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_19643
- Transcript Identifier COL.rna18406
- Gene Type Coding gene
- Location AWUE01016709.1 : 31646-36721 : negative
Gene Family Information
- ID HOM05D000324
- #Genes/#Species 1429/100
- Phylogenetic origin
- ID ORTHO05D002625
- #Genes/#Species 274/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna18406
- GenBank OMO89652.1
- id gene19615
- gene_name COLO4_19643
- uniprot A0A1R3J4A0
Descriptions
- Description AMP-dependent synthetase/ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006631 | ISO | PLAZA Integrative Orthology | fatty acid metabolic process | AT2G04350 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0004467 | ISO | PLAZA Integrative Orthology | long-chain fatty acid-CoA ligase activity | AT2G04350 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT2G04350 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G04350 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT2G04350 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.8.2.5 | Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.long-chain acyl-CoA synthetase (LACS9) |