Gene: COL.COLO4_18522

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_18522
  • Transcript Identifier COL.rna17285
  • Gene Type Coding gene
  • Location AWUE01016472.1 : 10279-11898 : negative

Gene Family Information

  • ID HOM05D003213
  • #Genes/#Species 213/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna17285
  • GenBank OMO91214.1
  • id gene18494
  • gene_name COLO4_18522
  • uniprot A0A1R3J8R2

Descriptions

  • Description Transcription initiation factor TFIIE, beta subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006367
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005673
IEA
GOA Databasetranscription factor TFIIE complex
GO:0005673
IEA
InterProtranscription factor TFIIE complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003166 Transcription factor TFIIE beta subunit, DNA-binding domain
IPR040501 TFA2, Winged helix domain 2
IPR016656 Transcription initiation factor TFIIE, beta subunit
Mapman id Description
15.3.3.3.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit beta