Gene: COL.COLO4_17850

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_17850
  • Transcript Identifier COL.rna16614
  • Gene Type Coding gene
  • Location AWUE01016392.1 : 46398-47552 : positive

Gene Family Information

  • ID HOM05D002845
  • #Genes/#Species 243/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna16614
  • GenBank OMO92114.1
  • id gene17822
  • gene_name COLO4_17850
  • uniprot A0A1R3JBB6

Descriptions

  • Description Zinc finger, RING-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0043161
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024964 CTLH/CRA C-terminal to LisH motif domain
IPR037683 Rmd5, degenerated RING (dRING) finger
IPR027370 RING-type zinc-finger, LisH dimerisation motif
IPR013144 CRA domain
IPR006595 CTLH, C-terminal LisH motif
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR045098 Fyv10 family
Mapman id Description
19.2.1.3.1.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin ligase component GID2