Gene: COL.COLO4_17815
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_17815
- Transcript Identifier COL.rna16579
- Gene Type Coding gene
- Location AWUE01016388.1 : 17823-19445 : positive
Gene Family Information
- ID HOM05D001034
- #Genes/#Species 585/100
- Phylogenetic origin
- ID ORTHO05D000955
- #Genes/#Species 540/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna16579
- GenBank OMO92162.1
- id gene17787
- gene_name COLO4_17815
- uniprot A0A1R3JBF2
Descriptions
- Description Aminotransferase, class IV
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009081 | IEA | GOA Database | branched-chain amino acid metabolic process | |
| GO:0009081 | IEA | InterPro | branched-chain amino acid metabolic process | |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT3G19710 |
| GO:0019761 | ISO | PLAZA Integrative Orthology | glucosinolate biosynthetic process | AT3G19710 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT3G19710 |
| GO:0071267 | ISO | PLAZA Integrative Orthology | L-methionine salvage | AT1G50110 |
| GO:0033506 | ISO | PLAZA Integrative Orthology | glucosinolate biosynthetic process from homomethionine | AT1G50110 |
| GO:0009082 | IEA | GOA Database | branched-chain amino acid biosynthetic process | |
| GO:0008652 | IEA | GOA Database | cellular amino acid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010326 | ISO | PLAZA Integrative Orthology | methionine-oxo-acid transaminase activity | AT1G50110 |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004084 | IEA | GOA Database | branched-chain-amino-acid transaminase activity | |
| GO:0004084 | IEA | InterPro | branched-chain-amino-acid transaminase activity | |
| GO:0050048 | IEA | GOA Database | L-leucine:2-oxoglutarate aminotransferase activity | |
| GO:0008483 | IEA | GOA Database | transaminase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0052654 | IEA | GOA Database | L-leucine transaminase activity | |
| GO:0052655 | IEA | GOA Database | L-valine transaminase activity | |
| GO:0052656 | IEA | GOA Database | L-isoleucine transaminase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G50110 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005786 | Branched-chain amino acid aminotransferase II |
| IPR043132 | Branched-chain-amino-acid aminotransferase-like, C-terminal |
| IPR001544 | Aminotransferase class IV |
| IPR043131 | Branched-chain-amino-acid aminotransferase-like, N-terminal |
| IPR033939 | Branched-chain aminotransferase |
| IPR036038 | Aminotransferase-like, PLP-dependent enzymes |
| Mapman id | Description |
|---|---|
| 4.1.2.2.8.6 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.valine/leucine/isoleucine aminotransferase |
| 4.1.3.2.4 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.valine/leucine/isoleucine aminotransferase |
| 4.2.7.1 | Amino acid metabolism.degradation.branched-chain amino acid.branched-chain aminotransferase (BCAT) |