Gene: COL.COLO4_16854

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_16854
  • Transcript Identifier COL.rna15618
  • Gene Type Coding gene
  • Location AWUE01016262.1 : 426-3156 : negative

Gene Family Information

  • ID HOM05D000030
  • #Genes/#Species 5403/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna15618
  • GenBank OMO93423.1
  • id gene16826
  • gene_name COLO4_16854
  • uniprot A0A1R3JF13

Descriptions

  • Description Peptidase C48, SUMO/Sentrin/Ubl1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008234
IEA
InterProcysteine-type peptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025525 hAT-like transposase, RNase-H fold
IPR038765 Papain-like cysteine peptidase superfamily
IPR008906 HAT, C-terminal dimerisation domain
IPR003653 Ulp1 protease family, C-terminal catalytic domain
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated