Gene: COL.COLO4_16784

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_16784
  • Transcript Identifier COL.rna15548
  • Gene Type Coding gene
  • Location AWUE01016252.1 : 8160-8495 : positive

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin
  • ID ORTHO05D156225
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna15548
  • GenBank OMO93608.1
  • id gene16756
  • gene_name COLO4_16784
  • uniprot A0A1R3JFK2

Descriptions

  • Description Pectinesterase, catalytic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045490
IEA
GOA Databasepectin catabolic process
GO:0042545
IEA
GOA Databasecell wall modification
GO:0042545
IEA
InterProcell wall modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IEA
InterPropectinesterase activity
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0004857
ISO
PLAZA Homology (enrichment)enzyme inhibitor activity HOM05D000036

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000070 Pectinesterase, catalytic
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase