Gene: COL.COLO4_16524

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_16524
  • Transcript Identifier COL.rna15291
  • Gene Type Coding gene
  • Location AWUE01016132.1 : 14253-16848 : positive

Gene Family Information

  • ID HOM05D000659
  • #Genes/#Species 863/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna15291
  • GenBank OMO94108.1
  • id gene16496
  • gene_name COLO4_16524
  • uniprot A0A1R3JGZ6

Descriptions

  • Description Peptidase S54, rhomboid
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0004252
IEA
GOA Databaseserine-type endopeptidase activity
GO:0004252
IEA
InterProserine-type endopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035952 Rhomboid-like superfamily
IPR022764 Peptidase S54, rhomboid domain
IPR002610 Peptidase S54, rhomboid
Mapman id Description
19.4.2.6 Protein homeostasis.proteolysis.serine-type peptidase activities.S54-class protease (RBL))