Gene: COL.COLO4_15973
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_15973
- Transcript Identifier COL.rna14744
- Gene Type Coding gene
- Location AWUE01015849.1 : 2234-6989 : positive
Gene Family Information
- ID HOM05D000161
- #Genes/#Species 2285/100
- Phylogenetic origin
- ID ORTHO05D000070
- #Genes/#Species 2531/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna14744
- GenBank OMO95326.1
- id gene15945
- gene_name COLO4_15973
- uniprot A0A1R3JKE3
Descriptions
- Description AUX/IAA protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Solyc09g064530.3 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT1G04100 |
| GO:0010600 | ISO | PLAZA Integrative Orthology | regulation of auxin biosynthetic process | Solyc09g064530.3 |
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT1G04550 |
| GO:0009880 | ISO | PLAZA Integrative Orthology | embryonic pattern specification | AT1G04550 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT1G04550 |
| GO:0010252 | ISO | PLAZA Integrative Orthology | auxin homeostasis | Solyc12g096980.3 |
| GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | Solyc12g096980.3 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT1G04550 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006353 | IEA | GOA Database | DNA-templated transcription, termination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G04100 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G04100 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G28640 |
| GO:0003690 | IEA | GOA Database | double-stranded DNA binding | |
| GO:0003690 | IEA | InterPro | double-stranded DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |