Gene: COL.COLO4_15413

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_15413
  • Transcript Identifier COL.rna14196
  • Gene Type Coding gene
  • Location AWUE01015672.1 : 100773-110772 : positive

Gene Family Information

  • ID HOM05D000200
  • #Genes/#Species 1958/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna14196
  • GenBank OMO96239.1
  • id gene15385
  • gene_name COLO4_15413
  • uniprot A0A1R3JMX2

Descriptions

  • Description IQ motif, EF-hand binding site
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030048
ISO
PLAZA Integrative Orthologyactin filament-based movement AT3G58160
GO:0007097
ISO
PLAZA Integrative Orthologynuclear migration AT4G33200
GO:2000769
ISO
PLAZA Integrative Orthologyregulation of establishment or maintenance of cell polarity regulating cell shape AT4G33200
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G08730
GO:0051640
ISO
PLAZA Integrative Orthologyorganelle localization AT1G08730
GO:0007015
IEA
GOA Databaseactin filament organization
GO:0007015
IEA
InterProactin filament organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000146
ISO
PLAZA Integrative Orthologymicrofilament motor activity AT1G08730
GO:0005515
IEA
InterProprotein binding
GO:0003774
IEA
GOA Databasemotor activity
GO:0003774
IEA
InterPromotor activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003779
IEA
GOA Databaseactin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016459
IEA
GOA Databasemyosin complex
GO:0016459
IEA
InterPromyosin complex
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G58160
GO:0031965
ISO
PLAZA Integrative Orthologynuclear membrane AT4G33200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002710 Dilute domain
IPR037975 Class XI myosin, cargo binding domain
IPR001609 Myosin head, motor domain
IPR000048 IQ motif, EF-hand binding site
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036018 Plant myosin, class XI, motor domain
IPR036961 Kinesin motor domain superfamily
Mapman id Description
20.2.4.1 Cytoskeleton organisation.microfilament network.myosin microfilament-based motor protein activities.class XI myosin