Gene: COL.COLO4_14438

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_14438
  • Transcript Identifier COL.rna13224
  • Gene Type Coding gene
  • Location AWUE01015425.1 : 52495-55783 : positive

Gene Family Information

  • ID HOM05D002125
  • #Genes/#Species 314/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna13224
  • GenBank OMO97691.1
  • id gene14410
  • gene_name COLO4_14438
  • uniprot A0A1R3JSH0

Descriptions

  • Description Leucine-rich repeat, cysteine-containing subtype
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G01720
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT5G01720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G01720
GO:0019005
ISO
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT5G01720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006553 Leucine-rich repeat, cysteine-containing subtype
IPR032675 Leucine-rich repeat domain superfamily
IPR001611 Leucine-rich repeat
Mapman id Description
19.2.2.8.1.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (RAE-like)