Gene: COL.COLO4_13619

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_13619
  • Transcript Identifier COL.rna12405
  • Gene Type Coding gene
  • Location AWUE01015209.1 : 151676-154486 : negative

Gene Family Information

  • ID HOM05D000417
  • #Genes/#Species 1223/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna12405
  • GenBank OMO98963.1
  • id gene13591
  • gene_name COLO4_13619
  • uniprot A0A1R3JVQ3

Descriptions

  • Description Glycoside hydrolase, family 17
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009832
ISO
PLAZA Integrative Orthologyplant-type cell wall biogenesis AT2G19440
GO:0009664
ISO
PLAZA Integrative Orthologyplant-type cell wall organization AT1G64760
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0052861
ISO
PLAZA Integrative Orthologyglucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group AT1G64760
GO:0042973
IEA
GOA Databaseglucan endo-1,3-beta-D-glucosidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT2G19440
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G19440
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G64760
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G64760
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044965 Glycoside hydrolase family 17, plant
IPR000490 Glycoside hydrolase family 17
IPR017853 Glycoside hydrolase superfamily
IPR012946 X8 domain
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase