Gene: COL.COLO4_13055

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_13055
  • Transcript Identifier COL.rna11844
  • Gene Type Coding gene
  • Location AWUE01015033.1 : 19279-20136 : positive

Gene Family Information

  • ID HOM05D001117
  • #Genes/#Species 550/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna11844
  • GenBank OMO99872.1
  • id gene13027
  • gene_name COLO4_13055
  • uniprot A0A1R3JYD7

Descriptions

  • Description Zinc finger, B-box
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G27310
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT4G27310
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G27310
GO:0010100
ISO
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT4G27310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G27310
GO:0003712
ISO
PLAZA Integrative Orthologytranscription coregulator activity AT4G27310
GO:0061629
ISO
PLAZA Integrative OrthologyRNA polymerase II-specific DNA-binding transcription factor binding AT4G27310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G27310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000315 B-box-type zinc finger
Mapman id Description
35.1 not assigned.annotated