Gene: COL.COLO4_13004
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_13004
- Transcript Identifier COL.rna11793
- Gene Type Coding gene
- Location AWUE01015009.1 : 25423-28966 : positive
Gene Family Information
- ID HOM05D000404
- #Genes/#Species 1248/99
- Phylogenetic origin
- ID ORTHO05D005114
- #Genes/#Species 164/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna11793
- GenBank OMO99972.1
- id gene12976
- gene_name COLO4_13004
- uniprot A0A1R3JYN3
Descriptions
- Description Glycoside hydrolase, family 14B, plant
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0000272 | IEA | GOA Database | polysaccharide catabolic process | |
| GO:0000272 | IEA | InterPro | polysaccharide catabolic process | |
| GO:0080027 | ISO | PLAZA Integrative Orthology | response to herbivore | AT4G15210 |
| GO:0005983 | ISO | PLAZA Integrative Orthology | starch catabolic process | AT4G15210 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0102229 | IEA | GOA Database | amylopectin maltohydrolase activity | |
| GO:0016161 | IEA | GOA Database | beta-amylase activity | |
| GO:0016161 | IEA | InterPro | beta-amylase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G32290 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G15210 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.2.3.3.1.2 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase |