Gene: COL.COLO4_11059
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_11059
- Transcript Identifier COL.rna9852
- Gene Type Coding gene
- Location AWUE01014632.1 : 17872-21075 : negative
Gene Family Information
- ID HOM05D000169
- #Genes/#Species 2209/100
- Phylogenetic origin
- ID ORTHO05D003054
- #Genes/#Species 246/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna9852
- GenBank OMP02475.1
- id gene11031
- gene_name COLO4_11059
- uniprot A0A1R3K5V2
Descriptions
- Description AMP-dependent synthetase/ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT4G05160 |
| GO:0009695 | ISO | PLAZA Integrative Orthology | jasmonic acid biosynthetic process | AT4G05160 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT4G05160 |
| GO:0009851 | ISO | PLAZA Integrative Orthology | auxin biosynthetic process | AT4G05160 |
| GO:0009850 | ISO | PLAZA Integrative Orthology | auxin metabolic process | AT4G05160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0004321 | ISO | PLAZA Integrative Orthology | fatty-acyl-CoA synthase activity | AT4G05160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT4G05160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |