Gene: COL.COLO4_10355

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_10355
  • Transcript Identifier COL.rna9150
  • Gene Type Coding gene
  • Location AWUE01014481.1 : 8823-9746 : positive

Gene Family Information

  • ID HOM05D001573
  • #Genes/#Species 406/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna9150
  • GenBank OMP03541.1
  • id gene10327
  • gene_name COLO4_10355
  • uniprot A0A1R3K8Y0

Descriptions

  • Description Transcription factor TFIIB
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070897
IEA
GOA Databasetranscription preinitiation complex assembly
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0000769
ISO
PLAZA Integrative Orthologysyncytium formation by mitosis without cytokinesis AT3G29380
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G29380
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT3G29380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0017025
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IEA
InterProTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G29380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR013137 Zinc finger, TFIIB-type
IPR000812 Transcription factor TFIIB
IPR013150 Transcription factor TFIIB, cyclin-like domain
IPR013763 Cyclin-like
Mapman id Description
35.1 not assigned.annotated