Gene: COL.COLO4_05433

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05433
  • Transcript Identifier COL.rna4254
  • Gene Type Coding gene
  • Location AWUE01012350.1 : 35675-44939 : positive

Gene Family Information

  • ID HOM05D000324
  • #Genes/#Species 1429/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4254
  • GenBank OMP09475.1
  • id gene5405
  • gene_name COLO4_05433
  • uniprot A0A1R3KQW1

Descriptions

  • Description AMP-dependent synthetase/ligase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030497
ISO
PLAZA Integrative Orthologyfatty acid elongation AT4G14070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity
GO:0008922
ISO
PLAZA Integrative Orthologylong-chain fatty acid [acyl-carrier-protein] ligase activity AT4G14070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G14070
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G14070
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT4G14070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042099 ANL, N-terminal domain
IPR000873 AMP-dependent synthetase/ligase
Mapman id Description
5.1.4.6.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.elongation of exogenous fatty acid chains.medium-chain acyl-ACP synthetase