Gene: COL.COLO4_05078

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05078
  • Transcript Identifier COL.rna3899
  • Gene Type Coding gene
  • Location AWUE01012145.1 : 16706-20170 : positive

Gene Family Information

  • ID HOM05D000013
  • #Genes/#Species 7509/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna3899
  • GenBank OMP09852.1
  • id gene5050
  • gene_name COLO4_05078
  • uniprot A0A1R3KRY3

Descriptions

  • Description S-locus glycoprotein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032497
ISO
PLAZA Integrative Orthologydetection of lipopolysaccharide AT1G61380
GO:0031663
ISO
PLAZA Integrative Orthologylipopolysaccharide-mediated signaling pathway AT1G61380
GO:0071446
ISO
PLAZA Integrative Orthologycellular response to salicylic acid stimulus AT1G11350
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT1G61380
GO:0006955
ISO
PLAZA Integrative Orthologyimmune response AT1G11330
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G11350
GO:0002221
ISO
PLAZA Integrative Orthologypattern recognition receptor signaling pathway AT1G61380
GO:0046777
ISO
PLAZA Integrative Orthologyprotein autophosphorylation AT1G61380
GO:0048544
IEA
GOA Databaserecognition of pollen
GO:0048544
IEA
InterProrecognition of pollen
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0006468
IEA
InterProprotein phosphorylation
GO:0016310
IEA
GOA Databasephosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0031625
ISO
PLAZA Integrative Orthologyubiquitin protein ligase binding AT1G61380
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb323690
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT1G11350
GO:0004713
ISO
PLAZA Integrative Orthologyprotein tyrosine kinase activity AT1G61380
GO:0038187
ISO
PLAZA Integrative Orthologypattern recognition receptor activity AT1G61380
GO:0106310
IEA
GOA Databaseprotein serine kinase activity
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0004674
IEA
InterProprotein serine/threonine kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0106311
IEA
GOA Databaseprotein threonine kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G61380
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036426 Bulb-type lectin domain superfamily
IPR001480 Bulb-type lectin domain
IPR024171 S-receptor-like serine/threonine-protein kinase
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009 Protein kinase-like domain superfamily
IPR000719 Protein kinase domain
IPR003609 PAN/Apple domain
IPR000858 S-locus glycoprotein domain
Mapman id Description
18.4.1.24.1 Protein modification.phosphorylation.TKL protein kinase superfamily.G-Lectin protein kinase families.protein kinase (SD-1)