Gene: COL.COLO4_04154

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_04154
  • Transcript Identifier COL.rna2985
  • Gene Type Coding gene
  • Location AWUE01011125.1 : 33773-36201 : negative

Gene Family Information

  • ID HOM05D006623
  • #Genes/#Species 121/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna2985
  • GenBank OMP10931.1
  • id gene4126
  • gene_name COLO4_04154
  • uniprot A0A1R3KV09

Descriptions

  • Description Pseudouridine synthase, RsuA/RluB/C/D/E/F
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
IEA
GOA DatabaseRNA modification
GO:0009451
IEA
InterProRNA modification
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
GOA Databasepseudouridine synthase activity
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR006145 Pseudouridine synthase, RsuA/RluA-like
Mapman id Description
16.5.3.4 RNA processing.RNA modification.pseudouridylation.dual-specificity tRNA/rRNA pseudouridine synthase (RluA)