Gene: COL.COLO4_03276
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_03276
- Transcript Identifier COL.rna2171
- Gene Type Coding gene
- Location AWUE01009473.1 : 468-1005 : positive
Gene Family Information
- ID HOM05D000743
- #Genes/#Species 785/85
- Phylogenetic origin
- ID ORTHO05D000580
- #Genes/#Species 764/85
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna2171
- GenBank OMP12370.1
- id gene3249
- gene_name COLO4_03276
- uniprot A0A1R3KZ81
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015986 | ISO | PLAZA Homology (enrichment) | ATP synthesis coupled proton transport | HOM05D000743 |
| GO:1902600 | IEA | GOA Database | proton transmembrane transport | |
| GO:1902600 | IEA | InterPro | proton transmembrane transport | |
| GO:0046034 | IEA | GOA Database | ATP metabolic process | |
| GO:0046034 | IEA | InterPro | ATP metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008266 | ISO | PLAZA Integrative Orthology | poly(U) RNA binding | AT2G07698 |
| GO:0051087 | ISO | PLAZA Integrative Orthology | chaperone binding | Zm00001eb434640 |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT2G07698 |
| GO:0005524 | IEA | GOA Database | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031966 | ISO | PLAZA Integrative Orthology | mitochondrial membrane | Zm00001eb434640 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G07698 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G07698 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G07698 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT2G07698 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT2G07698 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G07698 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR023366 | ATP synthase subunit alpha, N-terminal domain-like superfamily |
| IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily |
| IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |