Gene: COL.COLO4_00090
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_00090
- Transcript Identifier COL.rna85
- Gene Type Coding gene
- Location AWUE01000613.1 : 766-7240 : negative
Gene Family Information
- ID HOM05D000030
- #Genes/#Species 5403/88
- Phylogenetic origin
- ID ORTHO05D010590
- #Genes/#Species 56/5
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna85
- GenBank OMP14290.1
- id gene89
- gene_name COLO4_00090
- uniprot A0A1R3L4T4
Descriptions
- Description Peptidase C48, SUMO/Sentrin/Ubl1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006508 | IEA | InterPro | proteolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008234 | IEA | GOA Database | cysteine-type peptidase activity | |
| GO:0008234 | IEA | InterPro | cysteine-type peptidase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003653 | Ulp1 protease family, C-terminal catalytic domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR025525 | hAT-like transposase, RNase-H fold |
| IPR005202 | Transcription factor GRAS |
| IPR008906 | HAT, C-terminal dimerisation domain |
| IPR038765 | Papain-like cysteine peptidase superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |