Gene: CBR_g46718
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g46718
- Transcript Identifier GBG64761
- Gene Type Coding gene
- Location BFEA01000054 : 1330594-1385656 : negative
Gene Family Information
- ID HOM05D001007
- #Genes/#Species 602/100
- Phylogenetic origin
- ID ORTHO05D002932
- #Genes/#Species 253/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid GBG64761
- uniprot A0A388K3Z4
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006401 | IEA | GOA Database | RNA catabolic process | |
| GO:0006401 | IEA | InterPro | RNA catabolic process | |
| GO:0006364 | IEA | GOA Database | rRNA processing | |
| GO:0031125 | IEA | GOA Database | rRNA 3'-end processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003724 | IEA | GOA Database | RNA helicase activity | |
| GO:0003724 | IEA | InterPro | RNA helicase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004386 | IEA | GOA Database | helicase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005654 | IEA | GOA Database | nucleoplasm | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR012961 | ATP-dependent RNA helicase Ski2, C-terminal |
| IPR025696 | rRNA-processing arch domain |
| IPR016438 | ATP-dependent RNA helicase Ski2-like |
| Mapman id | Description |
|---|---|
| 16.4.1.2.3.1 | RNA processing.RNA surveillance.exosome complex.associated co-factor activities.Nuclear Exosome Targeting (NEXT) activation complex.RNA helicase component MTR4/HEN2 |