Gene: CARHR151390
General Information
Structural Information
- Species Cardamine hirsuta
- Gene Identifier CARHR151390
- Transcript Identifier CARHR151390.1
- Gene Type Coding gene
- Location Chr5 : 5301648-5303276 : negative
Gene Family Information
- ID HOM05D001688
- #Genes/#Species 383/97
- Phylogenetic origin
- ID ORTHO05D001571
- #Genes/#Species 387/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CARHR151390.1
Descriptions
- Description histone deacetylase 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT3G44750 |
| GO:0009294 | ISO | PLAZA Integrative Orthology | DNA mediated transformation | AT3G44750 |
| GO:0010162 | ISO | PLAZA Integrative Orthology | seed dormancy process | AT3G44750 |
| GO:0009944 | ISO | PLAZA Integrative Orthology | polarity specification of adaxial/abaxial axis | AT3G44750 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G44750 |
| GO:0004407 | ISO | PLAZA Integrative Orthology | histone deacetylase activity | AT3G44750 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G44750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041232 | Nucleoplasmin-like domain |
| Mapman id | Description |
|---|---|
| 12.3.2.2 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD2 histone deacetylase |