Gene: CARHR030280

General Information

Structural Information

Species Cardamine hirsuta
Gene Identifier CARHR030280
Transcript Identifier CARHR030280.1
Gene Type Coding gene
Location Chr1 : 11458288-11461774 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000329
#Genes/#Species 1418/100
Phylogenetic origin

ID ORTHO05D000833
#Genes/#Species 589/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid CARHR030280.1

Descriptions

Short descriptions
Ortholog descriptions

Description Lysine-specific demethylase 5A

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0048573	ISO	PLAZA Integrative Orthology	photoperiodism, flowering	AT1G30810
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G30810

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G30810
GO:0032453	ISO	PLAZA Integrative Orthology	histone demethylase activity (H3-K4 specific)	AT1G30810

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	InterPro	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003888	FY-rich, N-terminal
IPR003889	FY-rich, C-terminal
IPR003347	JmjC domain
IPR004198	Zinc finger, C5HC2-type
IPR003349	JmjN domain

Mapman id	Description
12.3.3.8.4	Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM7)