Gene: CANSAT64G0124

General Information

Structural Information

  • Species Cannabis sativa
  • Gene Identifier CANSAT64G0124
  • Transcript Identifier CANSAT64G0124.04
  • Gene Type Coding gene
  • Location NC_044379.1 : 62518398-62523459 : negative

Gene Family Information

  • ID HOM05D000974
  • #Genes/#Species 616/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_030627543.1
  • pid XP_030483403.1
  • id gene-LOC115699999

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT3G01150
GO:0000381
ISO
PLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosome AT3G01150
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT3G01150
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT3G01150
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT3G01150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G01150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G01150
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G01150
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT3G01150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR035979 RNA-binding domain superfamily
IPR034794 PTBPH1/PTBPH2, RNA recognition motif 3
IPR021790 PTBP1, RNA recognition motif 2-like
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034793 PTBPH1/PTBPH2, RNA recognition motif 2
IPR000504 RNA recognition motif domain
IPR034792 PTBPH1/PTBPH2, RNA recognition motif 1
Mapman id Description
16.2.6.7 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (PTB)