Gene: CANSAT56G0560

General Information

Structural Information

  • Species Cannabis sativa
  • Gene Identifier CANSAT56G0560
  • Transcript Identifier CANSAT56G0560.01
  • Gene Type Coding gene
  • Location NC_044371.1 : 41829119-41839178 : positive

Gene Family Information

  • ID HOM05D099300
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin
  • ID ORTHO05D450885
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_030633569.1
  • pid XP_030489429.1
  • id gene-LOC115706055

Descriptions

  • Description The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 13 bases in 9 codons
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
InterProhydrolase activity
GO:0004525
IEA
InterProribonuclease III activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038248 Dicer dimerisation domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036085 PAZ domain superfamily
IPR001650 Helicase, C-terminal
IPR014720 Double-stranded RNA-binding domain
IPR003100 PAZ domain
IPR006935 Helicase/UvrB, N-terminal
IPR000999 Ribonuclease III domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR036389 Ribonuclease III, endonuclease domain superfamily
Mapman id Description
16.9.2.1.1 RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.endoribonuclease component DCL1