Gene: CANSAT54G0682
General Information
Structural Information
- Species Cannabis sativa
- Gene Identifier CANSAT54G0682
- Transcript Identifier CANSAT54G0682.03
- Gene Type Coding gene
- Location NC_044375.1 : 92538641-92543414 : positive
Gene Family Information
- ID HOM05D001528
- #Genes/#Species 416/100
- Phylogenetic origin
- ID ORTHO05D006464
- #Genes/#Species 142/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna-XM_030648070.1
- pid XP_030503930.1
- id gene-LOC115719140
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1902196 | ISO | PLAZA Integrative Orthology | isovaleryl-CoA(4-) catabolic process | PGSC0003DMG400008113 |
| GO:0009083 | ISO | PLAZA Integrative Orthology | branched-chain amino acid catabolic process | AT3G45300 |
| GO:1902198 | ISO | PLAZA Integrative Orthology | 3-methylbut-2-enoyl-CoA(4-) metabolic process | PGSC0003DMG400008113 |
| GO:0006552 | ISO | PLAZA Integrative Orthology | leucine catabolic process | AT3G45300 |
| GO:1902192 | ISO | PLAZA Integrative Orthology | 2-methylbut-2-enoyl-CoA(4-) metabolic process | PGSC0003DMG400026901 |
| GO:1902190 | ISO | PLAZA Integrative Orthology | 2-methylbutanoyl-CoA(4-) catabolic process | PGSC0003DMG400026901 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0003995 | IEA | InterPro | acyl-CoA dehydrogenase activity | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0008470 | ISO | PLAZA Integrative Orthology | isovaleryl-CoA dehydrogenase activity | AT3G45300 |
| GO:0005524 | ISO | PLAZA Integrative Orthology | ATP binding | AT3G45300 |
| GO:0003853 | ISO | PLAZA Integrative Orthology | 2-methylacyl-CoA dehydrogenase activity | PGSC0003DMG400026901 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005759 | ISO | PLAZA Integrative Orthology | mitochondrial matrix | AT3G45300 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G45300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009100 | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily |
| IPR034183 | Isovaleryl-CoA dehydrogenase |
| IPR013786 | Acyl-CoA dehydrogenase/oxidase, N-terminal |
| IPR036250 | Acyl-CoA dehydrogenase-like, C-terminal |
| IPR009075 | Acyl-CoA dehydrogenase/oxidase C-terminal |
| IPR006091 | Acyl-CoA oxidase/dehydrogenase, central domain |
| IPR037069 | Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 4.2.7.3 | Amino acid metabolism.degradation.branched-chain amino acid.isovaleryl-CoA-dehydrogenase (IVDH) |