Gene: C09p55350
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C09p55350
- Transcript Identifier C09p55350
- Gene Type Coding gene
- Location C09 : 54048796-54057774 : positive
Gene Family Information
- ID HOM05D001035
- #Genes/#Species 585/100
- Phylogenetic origin
- ID ORTHO05D002212
- #Genes/#Species 307/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C09p55350.1_BnaDAR
- v5 BnaC09g37020D
- single_cell_id C09p55350.1-BnaDAR
- ensembl GSBRNA2T00094368001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046856 | IEA | InterPro | phosphatidylinositol dephosphorylation | |
| GO:0000724 | IEA | InterPro | double-strand break repair via homologous recombination | |
| GO:1990426 | IEA | InterPro | mitotic recombination-dependent replication fork processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043813 | IEA | InterPro | phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0000150 | IEA | InterPro | DNA strand exchange activity | |
| GO:0003690 | IEA | InterPro | double-stranded DNA binding | |
| GO:0003697 | IEA | InterPro | single-stranded DNA binding | |
| GO:0008094 | IEA | InterPro | ATPase, acting on DNA | |
| GO:0016791 | IEA | InterPro | phosphatase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033925 | Rad51/DMC1/RadA |
| IPR043573 | Polyphosphoinositide phosphatase Fig4-like |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR010995 | DNA repair Rad51/transcription factor NusA, alpha-helical |
| IPR011941 | DNA recombination/repair protein Rad51 |
| IPR013632 | DNA recombination and repair protein Rad51-like, C-terminal |
| IPR002013 | SAC domain |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 14.3.2.4 | DNA damage response.homologous recombination repair (HR).BRCC DNA-damage response complex.component RAD51 |
| 27.5.2.7.1 | Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.SAC phosphoinositide phosphatase activities.SAC-group-I phosphoinositide 3,5-phosphatase |