Gene: BraA09t38699Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA09t38699Z
- Transcript Identifier BraA09t38699Z
- Gene Type Coding gene
- Location A09 : 35635939-35636456 : negative
Gene Family Information
- ID HOM05D001563
- #Genes/#Species 409/100
- Phylogenetic origin
- ID ORTHO05D001956
- #Genes/#Species 333/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- uniprot A0A3P5YM70
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G60900 |
| GO:0006397 | ISO | PLAZA Homology (enrichment) | mRNA processing | HOM05D001563 |
| GO:0000398 | ISO | PLAZA Integrative Orthology | mRNA splicing, via spliceosome | AT1G60900 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G60900 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G60900 |
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT1G60900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.2.11.2 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor heterodimer.large subunit U2AF2/U2AF65 |