Gene: BraA08t34695Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA08t34695Z
- Transcript Identifier BraA08t34695Z
- Gene Type Coding gene
- Location A08 : 20916997-20919263 : positive
Gene Family Information
- ID HOM05D000319
- #Genes/#Species 1449/100
- Phylogenetic origin
- ID ORTHO05D002646
- #Genes/#Species 273/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot A0A3P6CAK2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G69670 |
| GO:0009960 | ISO | PLAZA Integrative Orthology | endosperm development | AT1G69670 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031625 | IEA | GOA Database | ubiquitin protein ligase binding | |
| GO:0031625 | IEA | InterPro | ubiquitin protein ligase binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G69670 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000151 | ISO | PLAZA Integrative Orthology | ubiquitin ligase complex | AT1G69670 |
| GO:0019005 | ISO | PLAZA Integrative Orthology | SCF ubiquitin ligase complex | AT1G69670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036317 | Cullin homology domain superfamily |
| IPR016159 | Cullin repeat-like-containing domain superfamily |
| IPR019559 | Cullin protein, neddylation domain |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR045093 | Cullin |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR001373 | Cullin, N-terminal |
| IPR016158 | Cullin homology domain |
| Mapman id | Description |
|---|---|
| 19.2.2.8.2.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.scaffold component CUL3 |