Gene: BraA07t29701Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA07t29701Z
- Transcript Identifier BraA07t29701Z
- Gene Type Coding gene
- Location A07 : 15714856-15721269 : positive
Gene Family Information
- ID HOM05D000528
- #Genes/#Species 1033/100
- Phylogenetic origin
- ID ORTHO05D001569
- #Genes/#Species 388/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot A0A3P6AX73
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080119 | ISO | PLAZA Integrative Orthology | ER body organization | AT5G39500 |
| GO:0006897 | ISO | PLAZA Integrative Orthology | endocytosis | AT5G39500 |
| GO:0006890 | ISO | PLAZA Integrative Orthology | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | AT5G39500 |
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0032012 | IEA | GOA Database | regulation of ARF protein signal transduction | |
| GO:0032012 | IEA | InterPro | regulation of ARF protein signal transduction | |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005085 | IEA | GOA Database | guanyl-nucleotide exchange factor activity | |
| GO:0005085 | IEA | InterPro | guanyl-nucleotide exchange factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G39500 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005829 | IEA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000904 | Sec7 domain |
| IPR023394 | Sec7, C-terminal domain superfamily |
| IPR038407 | Vesicle transport v-SNARE, N-terminal domain superfamily |
| IPR010989 | SNARE |
| IPR035999 | Sec7 domain superfamily |
| IPR007705 | Vesicle transport v-SNARE, N-terminal |
| IPR032691 | Guanine nucleotide exchange factor, N-terminal |
| Mapman id | Description |
|---|---|
| 22.3.2.2.1 | Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (GBF) |
| 22.3.5.1.2.1 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.VTI-group component |