Gene: BraA06t23766Z

General Information

Structural Information

  • Species Brassica rapa
  • Gene Identifier BraA06t23766Z
  • Transcript Identifier BraA06t23766Z
  • Gene Type Coding gene
  • Location A06 : 3377649-3393134 : positive

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • uniprot A0A3P5YCI8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043007
ISO
PLAZA Integrative Orthologymaintenance of rDNA AT1G08600
GO:1900049
ISO
PLAZA Integrative Orthologyregulation of histone exchange AT1G08600
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G08600
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc04g050150.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G08600
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc04g050150.4
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000781
IEA
GOA Databasechromosome, telomeric region
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR003889 FY-rich, C-terminal
IPR003347 JmjC domain
IPR004198 Zinc finger, C5HC2-type
IPR000330 SNF2, N-terminal
IPR003349 JmjN domain
IPR038718 SNF2-like, N-terminal domain superfamily
IPR003888 FY-rich, N-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR044574 ATPase ARIP4-like
Mapman id Description
12.3.3.8.4 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM7)
12.4.8.1.2 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad54-like group.chromatin remodeling factor (ATRX)